(qiime2-2020.11) conda list packages in environment at /home/qiime2/miniconda/envs/qiime2-2020.11: Name Version Build Channel Output_views = self._callable(**view_args) GNU nano 4.8 /tmp/qiime2-q2cli-err-rat58zqb.logĮxecuting jgi.BBMerge [in=/tmp/qiime2-archive-qstqyua0/8e2eaab4-8c65-44cf-abac> ![]() This is the error and the error log:Ĭommand '' returned non-zero exit status 1. The 'itsxpress>=1.8.0' distribution was not found and is required by the application There was a problem loading demux-full.qza as a QIIME 2 Result: Pkg_resources.DistributionNotFound: The 'itsxpress>=1.8.0' distribution was not found and is required by the application Raise DistributionNotFound(req, requirers) Items = working_set.resolve(reqs, env, installer, extras=self.extras)įile "/home/qiime2/miniconda/envs/qiime2-2020.11/lib/python3.6/site-packages/pkg_resources/ init.py", line 785, in resolve Qiime itsxpress trim-pair-output-unmerged \įile "/home/qiime2/miniconda/envs/qiime2-2020.11/lib/python3.6/site-packages/q2cli/click/type.py", line 112, in _convert_inputįile "/home/qiime2/miniconda/envs/qiime2-2020.11/lib/python3.6/site-packages/qiime2/sdk/result.py", line 66, in loadĪrchiver = (filepath)įile "/home/qiime2/miniconda/envs/qiime2-2020.11/lib/python3.6/site-packages/qiime2/core/archive/archiver.py", line 307, in loadįile "/home/qiime2/miniconda/envs/qiime2-2020.11/lib/python3.6/site-packages/qiime2/core/archive/format/v1.py", line 29, in initįile "/home/qiime2/miniconda/envs/qiime2-2020.11/lib/python3.6/site-packages/qiime2/core/archive/format/v0.py", line 73, in initįile "/home/qiime2/miniconda/envs/qiime2-2020.11/lib/python3.6/site-packages/qiime2/sdk/util.py", line 88, in parse_formatįile "/home/qiime2/miniconda/envs/qiime2-2020.11/lib/python3.6/site-packages/qiime2/sdk/plugin_manager.py", line 54, in newįile "/home/qiime2/miniconda/envs/qiime2-2020.11/lib/python3.6/site-packages/qiime2/sdk/plugin_manager.py", line 81, in _initįile "/home/qiime2/miniconda/envs/qiime2-2020.11/lib/python3.6/site-packages/pkg_resources/ init.py", line 2471, in loadįile "/home/qiime2/miniconda/envs/qiime2-2020.11/lib/python3.6/site-packages/pkg_resources/ init.py", line 2494, in require I tried your suggestion and this is what I got: Subprocess.CalledProcessError: Command '['bbmerge.sh', 'in=/tmp/qiime2-archive>įile "", line 2, in trim_pair_output_unmerged Java =/home/qiime2/miniconda/envs/qiime2-2020.11/opt/bbma>Įxecuting jgi.BBMerge [in=/tmp/qiime2-archive-zd8zpdnx/8e2eaab4-8c65-44cf-abac>Įxception in thread "main" : Unknown parameter maxmi>įile "/home/qiime2/miniconda/envs/qiime2-2020.11/lib/python3.6/site-packages>įile "/home/qiime2/miniconda/envs/qiime2-2020.11/lib/python3.6/subprocess.py> The error log file:ĮRROR:root:Could not perform read merging with BBmerge.
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